Last updated on 2025-09-26 20:48:44 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.43 | 241.06 | 253.49 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.43 | 235.10 | 245.53 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 355.03 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.43 | 272.92 | 286.35 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.63 | 254.74 | 270.37 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 295.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 182.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 284.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 233.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/217s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.751, system: 0.100, elapsed: 4.595 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.116, system: 0.242, elapsed: 19.970 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.023, elapsed: 0.414 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.933, system: 0.301, elapsed: 11.056 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.010, elapsed: 0.605 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.779, system: 0.931, elapsed: 39.098 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.655, system: 0.079, elapsed: 4.370 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.118, system: 0.161, elapsed: 20.641 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.024, elapsed: 0.454 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.906, system: 0.319, elapsed: 14.108 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.008, elapsed: 0.620 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.611, system: 0.732, elapsed: 42.255 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.671, system: 0.072, elapsed: 5.382 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.143, system: 0.223, elapsed: 31.580 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.026, elapsed: 0.509 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.942, system: 0.349, elapsed: 10.397 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.008, elapsed: 0.450 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.230, system: 0.299, elapsed: 2.542 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.044, system: 1.254, elapsed: 53.336 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.584, system: 0.071, elapsed: 4.036 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.161, system: 0.230, elapsed: 21.551 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.028, elapsed: 0.624 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.034, system: 0.379, elapsed: 11.158 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.010, elapsed: 0.476 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.963, system: 1.033, elapsed: 29.212 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.833, system: 2.025, elapsed: 69.238 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/191s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.571, system: 0.068, elapsed: 3.187 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.163, system: 0.225, elapsed: 23.669 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.022, elapsed: 0.530 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.878, system: 0.332, elapsed: 9.693 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.011, elapsed: 0.305 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.512, system: 0.691, elapsed: 38.783 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.669, system: 0.091, elapsed: 3.270 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.276, system: 0.329, elapsed: 20.206 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.024, elapsed: 0.493 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.941, system: 0.344, elapsed: 8.841 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.017, elapsed: 0.606 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.836, system: 0.916, elapsed: 34.849 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.710, system: 0.088, elapsed: 4.305 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.206, system: 0.310, elapsed: 20.649 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.032, elapsed: 0.789 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.725, system: 0.323, elapsed: 11.673 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.026, elapsed: 0.439 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.141, system: 0.328, elapsed: 2.029 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.865, system: 1.436, elapsed: 42.759 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.699, system: 0.127, elapsed: 4.826 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.127, system: 0.242, elapsed: 18.726 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.024, elapsed: 0.355 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.638, system: 0.286, elapsed: 8.465 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.007, elapsed: 0.415 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.520, system: 1.003, elapsed: 24.354 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.059, system: 1.920, elapsed: 59.527 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64